BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035H06LP1|AL430130
(885 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1322 1412 0.0
>3x_Contig1322
Length = 7535
Score = 1412 bits (707), Expect = 0.0
Identities = 850/883 (96%), Gaps = 18/883 (2%)
Strand = Plus / Minus
Query: 1 atcaactaagtacattaaargatttccgtgtcagaattctacccgtcttgggaaccatgc 60
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2297 atcaactaagtgcattaaaggatttccgtgtcagaattctacccgtcttgggaaccatgc 2238
Query: 61 caggtgtattttgggttgamtattgctatattgggtcttatgtaagattagcggttamcc 120
||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||| ||
Sbjct: 2237 caggtgt-ttttgggttgactattgctac-ttgggtcttatgtaagattagcggttaccc 2180
Query: 121 aatggaaccaatagaaggtaagaacagaatacaaattgtacgatggcatttatcaatcct 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2179 aatggaaccaatagaaggtaagaacagaat-caaattgtacgatggcatttatcaatcct 2121
Query: 181 tagctggtcaaatgamgcgtattggtcaaaaagaccaaagaattccaatgtgcactaagt 240
||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2120 tagctggtcaaatgacgcgtattggtcaaaaagaccaaagaattccaat-tgcactaagt 2062
Query: 241 racattggatacatwgtggaggaagtgtggagaggtaaatcaccaatcagtaactattct 300
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2061 gacattggatacattgtggaggaagtgtggagaggtaaatcaccaatcagtaactattct 2002
Query: 301 actaggttatatcatttatcgcaacatgggatccaacaaagcgcagtaarcattcacaaa 360
||||||||| | ||||| ||| ||||||||||||||||| |||| | |||||| |||
Sbjct: 2001 actaggttaact---ttatc-caa-atgggatccaacaaagc-cagtgagcattca-aaa 1949
Query: 361 cgtcatactgctaaccaaagatgagcaaagggagctatgaaagctagaatcttgaacggt 420
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 1948 cgtcatactgctaaccaaagatgagcaaagggagc-atgaa-gctagaatcttgaacggt 1891
Query: 421 accgagacattttctgatgtatactctgaagaagctttagcaatgattaataaaaggttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1890 accgagacattttctgatgtatactctgaagaagctttagcaatgattaataaaaggttc 1831
Query: 481 caagaagagttgtactattactcagcttcaggctgaacgagattataagaggagaataca 540
||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||
Sbjct: 1830 caagaagagttgtactatt-ctcag-ttcagg-tgaacgagattataagaggagaataca 1774
Query: 541 cttcgttgaaaatgttggctattggcataggttttcataccatttaagaatttttgtatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1773 cttcgttgaaaatgttggctattggcataggttttcataccatttaagaatttttgtatt 1714
Query: 601 ctaagtttttaaacatcgtcaatatatgtacatatatatatccaacatatgccatcaccc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1713 ctaagtttttaaacatcgtcaatatatgtacatatatatatccaacatatgccatcaccc 1654
Query: 661 tagtgatagatcagaatttataaaagtgtaatagtatcgttagaatttgtcgtagtgtaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1653 tagtgatagatcagaatttataaaagtgtaatagtatcgttagaatttgtcgtagtgtaa 1594
Query: 721 aagccatgacgcacccgacatagagtaaagataatgagaaaawgtagagttagaagaaca 780
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 1593 aagccatgacgcacccgacatagagtaaagataatgagaaaa-gtagagtaagaagaaca 1535
Query: 781 tatgcatagaagaaaaaagawaataatcatgaagttatgtcgagggaaggaaagcagtgt 840
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1534 tatgcatagaagaaaaaagataataatcatgaagttatgtcgagggaaggaaagcagtgt 1475
Query: 841 tttgttttkcatggtttagaa-ccttttcgaaaatgcagagca 882
|||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 1474 tttgttttgcatggtttagaagccttttcgaaaatgcagagca 1432
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6145
Number of Sequences: 1807
Number of extensions: 6145
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 885
length of database: 10,358,551
effective HSP length: 16
effective length of query: 869
effective length of database: 10,329,639
effective search space: 8976456291
effective search space used: 8976456291
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)